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on parental leave until 2027 I'll reply to emails when I can. Thanks for your patience!

Christopher E. Miles
Office 106 LCBLeRoy Cowles Building Google Maps Campus map

News Welcome Tim Tian, joining from UBC as a postdoc.

Older news (28)
  1. Congratulations to Rebecca on posting her new preprint on identifiability & physics-informed ML!
  2. Our paper on how the kinetochore corona orchestrates chromosome congression is out in PNAS!
  3. Paper with Rob Webber on variational Markov chain mixtures accepted in Statistics & Computing.
  4. New preprint on reconstructing actin dynamics from observational data with the Mogilner and Danuser groups.
  5. Chris gave a Science @ Breakfast talk on math modeling & AI for transcriptomics.
  6. Welcome Matt Lastner — our first PhD student at Utah!
  7. Chris joins the University of Utah Department of Mathematics as Associate Professor!
  8. Travel support applications open for our NITMB workshop on Machine Learning of Cytoskeletal Machines, Nov 3-5.
  9. Excited to share a new NSF/NIH (NIGMS) grant to study RNA splicing with the Ding lab!
  10. Join us for the MDDLS conference on Mar 20-21, 2025!
  11. A new preprint extending our spatial Poisson process model to bursty transcription.
  12. Chris wins the Distinguished Early-Career Faculty Award for Teaching.
  13. bioRxiv preprint on ribosome dynamics from collaboration with the Shi lab.
  14. Chris joins the editorial board of the Bulletin of Math Biology.
  15. New preprint with Rob Webber on clustering time series.
  16. Welcome summer MathExpLR students Christopher, Dhara, & Luca!
  17. Two new PhD students join the group: welcome Jacy & Austin!
  18. Trini defended her thesis! Congrats to the first PhD graduate of the group!
  19. Funded by an NSF CAREER grant (2024-2029)!
  20. Two preprints: Trini's kinesin binding work and point process inference.
  21. Welcome summer MathBioU & MathExpLR students Aditya & Masha!
  22. Congrats Pei for posting her preprint on clustering heterogeneous collectives! Trini wins the Dean's Dissertation Fellowship! Chris named a 2023 Hellman Fellow.
  23. Organizing SoCAMS at UCI.
  24. Preprint with Bhargav Karamched on stochastic delayed feedback in gene regulation.
  25. New preprint with Sophie Marbach on fast cross-linking molecules.
  26. Current Biology dispatch with Alex Mogilner on Brownian ratchets.
  27. Chris speaks at SIAM Life Sciences and SIAM Data Science.
  28. Welcome MathExpLR & MathBioU summer students Tanya, David, and Claire!

Research

Funded by NSF NIH/NIGMS Hellman Fellows Fund

Spatial genomics

papers
  • transcriptional bursting
  • RNA localization
  • splicing
  • nuclear organization
  • spatial transcriptomics
  • point processes

Cytoskeleton & cell division

papers
  • molecular motors
  • cargo transport
  • mitosis & meiosis
  • kinetochores
  • actin dynamics
  • jump-diffusions

Scientific ML & AI

papers
  • simulation-based & Bayesian inference
  • physics-informed ML
  • operator learning
  • variational methods
  • identifiability
  1. 2026
    1. preprint
    2. preprint
    3. PNAS
    4. PNAS
    5. J Comp Phys
    6. Nat Commun
    7. Stat Comput
  2. 2025
    1. Bioinformatics
    2. Curr Opin Sys Bio
    3. J Biomech Eng
    4. J R Soc Interface
    5. Traffic
  3. 2024
    1. Coaching ribosome biogenesis from the nuclear periphery

      Y Zhuang, X Guo, OV Razorenova, CE Miles, W Zhao, X Shi

      preprint
    2. Bull Math Bio
    3. PLoS Comp Bio
    4. Phys Rev E
  4. 2023
    1. SIAM News
    2. J R Soc Interface
    3. J Chem Phys
  5. 2022
    1. Curr Biol
    2. Curr Biol
    3. Bull Math Bio
  6. 2021
    1. Collective Molecular Motor Transport

      CE Miles, A Mogilnerbook chapter

      Case Stud Sys Bio
  7. 2020
    1. Open Biology
    2. Actin-Membrane Release Initiates Cell Protrusions

      ES Welf, CE Miles, …, A Mogilner, G Danuser

      Dev Cell
    3. Phys Rev Lett
  8. 2019
    1. J Nonlinear Sci
    2. Complex nearly immotile behavior of microtubule-associated cargos

      O Osunbayo, CE Miles, BJ Reddy, JP Keener, MD Vershinin

      Soft Matter
    3. SIAM J Appl Math
  9. 2018
    1. SIAM J Appl Math
  10. 2017
    1. J Phys A
    2. J Theor Bio

Team

Tim Tian

Tim Tian

Postdoc · Utah Math

plant cortical microtubules, geometry + stochastic modeling

fav veggie: napa cabbage

Jacy Zanussi

Jacy Zanussi

PhD Student · UCI MCSB

methods for simulation-based inference (co-advised w/ John Lowengrub)

fav veggie: all peppers honorary

Austin Marcus

Austin Marcus

PhD Student · UCI MCSB

nuclear condensates, cilia (co-advised w/ Jun Allard)

fav veggie: onion

Rebecca (Rujie) Gu

Rebecca (Rujie) Gu

PhD Student · UCI Math

physics-informed neural networks + point processes

fav veggie: spinach

Matt Lastner

Matt Lastner

PhD Student · Utah Math Bio

meiosis biophysics, polymer models (co-advised w/ Ofer Rog)

fav veggie: sweet potato

You?

Prospective students: apply to Utah Math and/or reach out to Chris.

fav veggie: be ready to defend it

Alumni (10)
Trini Nguyen

Trini Nguyen

MCSB PhD 2024 (co-advised w/ Steve Gross)

after: Postdoc, Cedars-Sinai Hospital

fav veggie: bittermelon

Pei Tan

Pei Tan

MCSB MS 2023

after: Bioinformatics Specialist, UCI Med.

fav veggie: any appetizer

Christopher Au

Christopher Au

2024 MathExpLR high school student

fav veggie: tomato honorary

Dhara Hansalia

Dhara Hansalia

2024 MathExpLR high school student

fav veggie: cucumber

Luca Valdevit

Luca Valdevit

2024 MathExpLR high school student

fav veggie: potato

Aditya Radhakrishnan

Aditya Radhakrishnan

2023 MathBioU undergrad

fav veggie: cauliflower

Masha Gorodetski

Masha Gorodetski

2023 MathExpLR high school student

fav veggie: carrots

Junyi (Claire) Li

Junyi (Claire) Li

2022 MathExpLR high school student

fav veggie: potatoes

Tanya Vidhun

Tanya Vidhun

2022 MathExpLR high school student

fav veggie: spinach

David Militante

David Militante

2022 MathBioU undergrad

fav veggie: carrots

Chris Miles

Chris Miles

PI · Utah Math

Hobbies: skiing when it snows, gaming when it doesn't (mostly the case, lately).

Not to be confused with: Chris Miles (rapper), Christopher J. Miles (other mathematician), or Chris Miles (artist).

  1. 2013BS ECE, BS MathLafayette College
  2. 2018PhD MathematicsUniversity of Utahadvisor: Jim Keener
  3. 2018–21Courant InstructorCourant Institute, NYUmentor: Alex Mogilner
  4. 2021–25Assistant ProfessorUC Irvine
  5. 2025–nowAssociate ProfessorUniversity of Utah